EnhancerDB
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  3. rs560319944[chr6:44041308]
Enhancers that have rs560319944[chr6:44041308]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 43975688 44057369 enh9138
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs560319944[chr6:44041308]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 44039982 44042697 POLR2A UCSC Txn Factor no Conserved 108540407
chr6 44040787 44041337 TCF7L2 UCSC Txn Factor no Conserved 108540409
chr6 44041035 44041979 YY1 UCSC Txn Factor no Conserved 108540413
chr6 44041307 44041317 SP1 JASPAR yes 101820816
Genes associated with rs560319944[chr6:44041308], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More