EnhancerDB
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  3. rs560333364[chr1:27771844]
Enhancers that have rs560333364[chr1:27771844]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27742945 27784244 enh174
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs560333364[chr1:27771844]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27771606 27772236 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107802579
chr1 27771842 27771854 PKNOX1 JASPAR yes 27695042
chr1 27771842 27771854 TGIF1 JASPAR yes 27695043
chr1 27771842 27771854 TGIF2 JASPAR yes 27695044
Genes associated with rs560333364[chr1:27771844], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More