EnhancerDB
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  3. rs560385402[chr6:44050567]
Enhancers that have rs560385402[chr6:44050567]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 43975688 44057369 enh9138
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr6 44050434 44050837 vista52063
VISTA
Transcript factors that have rs560385402[chr6:44050567]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 44050548 44051020 POLR2A UCSC Txn Factor no Conserved 108540419
chr6 44050557 44050567 POU6F2 JASPAR yes 70369604
chr6 44050557 44050567 POU6F2 JASPAR yes 101822138
chr6 44050558 44050568 ALX3 JASPAR yes 70369605
chr6 44050558 44050568 GSX1 JASPAR yes 70369606
chr6 44050558 44050568 MEOX1 JASPAR yes 70369607
chr6 44050558 44050568 ALX3 JASPAR yes 101822139
chr6 44050558 44050568 GSX1 JASPAR yes 101822140
chr6 44050558 44050568 MEOX1 JASPAR yes 101822141
chr6 44050558 44050570 MEF2A JASPAR yes 70369608
chr6 44050558 44050570 MEF2D JASPAR yes 70369609
chr6 44050558 44050570 MEF2A JASPAR yes 101822142
chr6 44050558 44050570 MEF2D JASPAR yes 101822143
chr6 44050559 44050567 LBX1 JASPAR yes 70369610
chr6 44050559 44050567 PDX1 JASPAR yes 70369611
chr6 44050559 44050567 VAX1 JASPAR yes 70369612
chr6 44050559 44050567 VAX2 JASPAR yes 70369613
chr6 44050559 44050567 VSX1 JASPAR yes 70369614
chr6 44050559 44050567 VSX2 JASPAR yes 70369615
chr6 44050559 44050567 LBX1 JASPAR yes 101822144
chr6 44050559 44050567 PDX1 JASPAR yes 101822145
chr6 44050559 44050567 VAX1 JASPAR yes 101822146
chr6 44050559 44050567 VAX2 JASPAR yes 101822147
chr6 44050559 44050567 VSX1 JASPAR yes 101822148
chr6 44050559 44050567 VSX2 JASPAR yes 101822149
chr6 44050559 44050569 MEF2A JASPAR yes 70369616
chr6 44050559 44050569 MEF2A JASPAR yes 101822150
chr6 44050562 44050577 MEF2C JASPAR yes 70369617
chr6 44050562 44050577 MEF2C JASPAR yes 101822151
chr6 44050563 44050578 MEF2A JASPAR yes 70369618
chr6 44050563 44050578 MEF2A JASPAR yes 101822152
chr6 44050564 44050568 TEAD2 TRANSFAC yes 70369619
chr6 44050564 44050568 TEAD2 TRANSFAC yes 101822153
chr6 44050564 44050569 TBP TRANSFAC yes 70369620
chr6 44050564 44050569 TBP TRANSFAC yes 101822154
chr6 44050564 44050570 TFIID TRANSFAC yes 70369621
chr6 44050564 44050570 TFIID TRANSFAC yes 101822155
chr6 44050564 44050575 FOXC1 JASPAR yes 70369622
chr6 44050564 44050575 FOXC1 JASPAR yes 101822156
chr6 44050564 44050576 FOXC2 JASPAR yes 70369623
chr6 44050564 44050576 MEF2A JASPAR yes 70369624
chr6 44050564 44050576 MEF2B JASPAR yes 70369625
chr6 44050564 44050576 MEF2D JASPAR yes 70369626
chr6 44050564 44050576 FOXC2 JASPAR yes 101822157
chr6 44050564 44050576 MEF2A JASPAR yes 101822158
chr6 44050564 44050576 MEF2B JASPAR yes 101822159
chr6 44050564 44050576 MEF2D JASPAR yes 101822160
chr6 44050565 44050575 MEF2A JASPAR yes 70369627
chr6 44050565 44050575 MEF2A JASPAR yes 101822161
Genes associated with rs560385402[chr6:44050567], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More