EnhancerDB
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  3. rs560435177[chr17:28051599]
Enhancers that have rs560435177[chr17:28051599]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 28029886 28064015 enh4330
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs560435177[chr17:28051599]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 28051593 28051614 IRF1 JASPAR yes 53753864
chr17 28051595 28051616 IRF1 JASPAR yes 53753865
chr17 28051596 28051611 FOXP1 JASPAR yes 53753866
chr17 28051596 28051617 IRF1 JASPAR yes 53753867
chr17 28051597 28051618 IRF1 JASPAR yes 53753868
chr17 28051598 28051613 FOXP1 JASPAR yes 53753869
chr17 28051598 28051619 IRF1 JASPAR yes 53753870
chr17 28051599 28051614 FOXP1 JASPAR yes 53753871
chr17 28051599 28051620 IRF1 JASPAR yes 53753872
Genes associated with rs560435177[chr17:28051599], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More