EnhancerDB
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  3. rs560441934[chr12:46831261]
Enhancers that have rs560441934[chr12:46831261]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 46820955 46858735 enh14676
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs560441934[chr12:46831261]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 46830346 46831424 P63 GTRD no Skin (Keratinocyte) 21541614
chr12 46830357 46831544 P63 GTRD no Skin (Keratinocyte) 21541615
chr12 46830405 46831396 P63 GTRD no Skin (Keratinocyte) 21541616
chr12 46830457 46831414 P63 GTRD no Skin (Keratinocyte) 21541617
chr12 46830532 46831734 TCF7L2 GTRD no Colon (HCT116) 21541618
chr12 46830818 46831422 ZNF274 GTRD no Bone Marrow (K562) 21541619
chr12 46830845 46832062 TCF7L2 GTRD no Colon (HCT116) 21541620
chr12 46831148 46831478 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21541621
chr12 46831162 46831896 TCF7L2 GTRD no Colon (HCT116) 21541622
chr12 46831219 46831559 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21541623
chr12 46831250 46831570 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21541624
chr12 46831251 46831266 SOX21 JASPAR yes 120620276
chr12 46831251 46831267 SOX4 JASPAR yes 120620277
chr12 46831259 46831263 YY1 TRANSFAC yes 120620279
Genes associated with rs560441934[chr12:46831261], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More