EnhancerDB
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  3. rs560482525[chr1:43398373]
Enhancers that have rs560482525[chr1:43398373]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 43394865 43408895 enh296
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Muscle (A673) Heart
Transcript factors that have rs560482525[chr1:43398373]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 43398365 43398373 TBX5 JASPAR yes 28467668
chr1 43398368 43398377 THAP1 JASPAR yes 28467669
chr1 43398369 43398387 ESR1 JASPAR yes 28467670
chr1 43398371 43398375 LFA1 TRANSFAC yes 28467671
Genes associated with rs560482525[chr1:43398373], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More