EnhancerDB
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  3. rs560487633[chr2:227524263]
Enhancers that have rs560487633[chr2:227524263]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 227505953 227529050 enh19283
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr2 227524213 227524410 vista34995
VISTA
Transcript factors that have rs560487633[chr2:227524263]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 227524256 227524276 RREB1 JASPAR yes 22220964
chr2 227524256 227524276 RREB1 JASPAR yes 81480060
chr2 227524262 227524277 SOX21 JASPAR yes 22220965
chr2 227524262 227524277 SOX21 JASPAR yes 81480061
Genes associated with rs560487633[chr2:227524263], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More