EnhancerDB
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  3. rs560501079[chr15:57853861]
Enhancers that have rs560501079[chr15:57853861]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 57837548 57865675 enh52023
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Ovary Liver Bone (Osteoblast) Stomach Muscle (A673) Colon (HCT116) Uterus Lung (PC-9) Pancreas Neural Stem Cells (H9) Heart
chr15 57853638 57853874 vista20093
VISTA
Transcript factors that have rs560501079[chr15:57853861]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 57853406 57854002 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108140410
chr15 57853468 57854064 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108140411
chr15 57853510 57853920 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108140412
chr15 57853550 57854014 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21655184
chr15 57853550 57854014 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108140413
chr15 57853652 57853928 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108140414
chr15 57853686 57853890 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108140415
chr15 57853725 57853965 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21655185
chr15 57853725 57853965 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108140417
chr15 57853860 57853865 TFAP2A TRANSFAC yes 23622587
chr15 57853860 57853865 TFAP2A TRANSFAC yes 70529693
chr15 57853860 57853866 MZF1 JASPAR yes 23622588
chr15 57853860 57853866 MZF1 JASPAR yes 70529694
chr15 57853861 57853872 NFKB1 JASPAR yes 23622589
chr15 57853861 57853872 NFKB1 JASPAR yes 70529695
Genes associated with rs560501079[chr15:57853861], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More