EnhancerDB
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  3. rs560505874[chr17:46081286]
Enhancers that have rs560505874[chr17:46081286]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 46058151 46084696 enh4448
Liver Astrocyte Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs560505874[chr17:46081286]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 46078947 46083833 ZNF274 GTRD no Bone Marrow (K562) 108267670
chr17 46078947 46083833 ZNF274 GTRD no Bone Marrow (K562) 108267671
chr17 46078947 46083833 ZNF274 GTRD no Bone Marrow (K562) 108267672
chr17 46080717 46081417 ZNF274 GTRD no Liver (HepG2) 108267735
chr17 46080724 46081394 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21767395
chr17 46080724 46081394 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108267736
chr17 46080805 46081474 ZNF274 GTRD no Bone Marrow (K562) 108267739
chr17 46080842 46081384 ZNF274 GTRD no Liver (HepG2) 108267741
chr17 46080861 46081467 ZNF274 GTRD no Liver (HepG2) 108267742
chr17 46081231 46081471 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21767398
chr17 46081280 46081290 SP1 JASPAR yes 54551866
chr17 46081283 46081288 SP1 TRANSFAC yes 54551867
chr17 46081283 46081289 SP1 TRANSFAC yes 54551868
chr17 46081283 46081290 SP1 TRANSFAC yes 54551869
chr17 46081284 46081294 ZNF740 JASPAR yes 54551870
Genes associated with rs560505874[chr17:46081286], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More