EnhancerDB
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  3. rs560523520[chr19:5947324]
Enhancers that have rs560523520[chr19:5947324]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 5941853 5970935 enh4982
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs560523520[chr19:5947324]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 5947321 5947336 FOXP1 JASPAR yes 112246626
chr19 5947322 5947337 FOXP1 JASPAR yes 112246627
chr19 5947323 5947338 FOXP1 JASPAR yes 112246628
chr19 5947323 5947344 IRF1 JASPAR yes 112246629
chr19 5947324 5947339 FOXP1 JASPAR yes 112246630
chr19 5947324 5947345 IRF1 JASPAR yes 112246631
Genes associated with rs560523520[chr19:5947324], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More