EnhancerDB
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  3. rs560532420[chr17:48965101]
Enhancers that have rs560532420[chr17:48965101]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 48954425 48973436 enh32228
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs560532420[chr17:48965101]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 48965096 48965106 HMBOX1 JASPAR yes 54729307
chr17 48965101 48965121 RREB1 JASPAR yes 54729308
Genes associated with rs560532420[chr17:48965101], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More