EnhancerDB
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  3. rs560534741[chr11:20053280]
Enhancers that have rs560534741[chr11:20053280]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 20020085 20069135 enh13838
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Ovary Liver Bone (Osteoblast) Lung (PC-9) Stomach Placenta Thyroid Uterus Muscle (Myoblast) Pancreas Neural Stem Cells (H9) Heart
chr11 20053197 20053569 vista9828
VISTA
Transcript factors that have rs560534741[chr11:20053280]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 20053219 20053715 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21473821
chr11 20053219 20053715 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 107961546
chr11 20053227 20053797 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21473822
chr11 20053227 20053797 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 107961547
chr11 20053227 20053797 ZNF217 UCSC Txn Factor no Conserved 107961548
chr11 20053243 20053753 GATA3 UCSC Txn Factor no Conserved 107961549
chr11 20053244 20054268 P63 GTRD no Skin (Keratinocyte) 21473823
chr11 20053244 20054268 P63 GTRD no Skin (Keratinocyte) 107961550
chr11 20053266 20053287 IRF1 JASPAR yes 37828688
chr11 20053266 20053287 IRF1 JASPAR yes 114049631
chr11 20053268 20053283 PRDM1 JASPAR yes 37828689
chr11 20053268 20053283 PRDM1 JASPAR yes 114049632
chr11 20053270 20053282 IRF1 JASPAR yes 37828691
chr11 20053270 20053282 IRF1 JASPAR yes 114049634
chr11 20053270 20053284 IRF7 JASPAR yes 37828692
chr11 20053270 20053284 IRF7 JASPAR yes 114049635
chr11 20053270 20053285 IRF9 JASPAR yes 37828693
chr11 20053270 20053285 IRF9 JASPAR yes 114049636
chr11 20053274 20053294 RREB1 JASPAR yes 37828694
chr11 20053274 20053294 RREB1 JASPAR yes 114049637
chr11 20053276 20053296 RREB1 JASPAR yes 37828695
chr11 20053276 20053296 RREB1 JASPAR yes 114049638
chr11 20053277 20053283 SOX10 JASPAR yes 37828696
chr11 20053277 20053283 SOX10 JASPAR yes 114049639
chr11 20053278 20053298 RREB1 JASPAR yes 37828697
chr11 20053278 20053298 RREB1 JASPAR yes 114049640
chr11 20053280 20053300 RREB1 JASPAR yes 37828698
chr11 20053280 20053300 RREB1 JASPAR yes 114049641
Genes associated with rs560534741[chr11:20053280], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More