EnhancerDB
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  3. rs56055017[chr12:46604592]
Enhancers that have rs56055017[chr12:46604592]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 46599536 46618695 enh2312
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (A673) Heart
Transcript factors that have rs56055017[chr12:46604592]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 46603926 46605045 ZNF143 GTRD no Epithelial (MCF-7) 21541049
chr12 46603926 46605045 ZNF143 GTRD no Epithelial (MCF-7) 108026928
chr12 46604586 46604596 MAX JASPAR yes 120603576
chr12 46604587 46604597 MNT JASPAR yes 120603577
chr12 46604588 46604595 USF1 JASPAR yes 120603578
chr12 46604589 46604594 MYC TRANSFAC yes 120603579
chr12 46604589 46604594 USF1 TRANSFAC yes 120603580
chr12 46604589 46604594 USF2 TRANSFAC yes 120603581
chr12 46604589 46604596 USF1 JASPAR yes 120603582
Genes associated with rs56055017[chr12:46604592], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More