EnhancerDB
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  3. rs560581620[chr17:2791945]
Enhancers that have rs560581620[chr17:2791945]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 2744850 2808324 enh4213
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Neural Stem Cells (H9) Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs560581620[chr17:2791945]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 2791929 2791950 IRF1 JASPAR yes 52782641
chr17 2791930 2791951 IRF1 JASPAR yes 52782642
chr17 2791934 2791955 IRF1 JASPAR yes 52782643
chr17 2791935 2791950 FOXP1 JASPAR yes 52782644
chr17 2791935 2791956 IRF1 JASPAR yes 52782645
chr17 2791936 2791951 PRDM1 JASPAR yes 52782646
chr17 2791936 2791957 IRF1 JASPAR yes 52782647
chr17 2791940 2791961 IRF1 JASPAR yes 52782648
chr17 2791941 2791956 FOXP1 JASPAR yes 52782649
chr17 2791941 2791962 IRF1 JASPAR yes 52782650
chr17 2791942 2791963 IRF1 JASPAR yes 52782651
chr17 2791943 2791958 FOXP1 JASPAR yes 52782652
chr17 2791943 2791964 IRF1 JASPAR yes 52782653
chr17 2791945 2791960 FOXP1 JASPAR yes 52782654
Genes associated with rs560581620[chr17:2791945], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More