EnhancerDB
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  3. rs560582973[chr6:47053560]
Enhancers that have rs560582973[chr6:47053560]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 47048805 47068805 enh23286
Liver Pancreas Uterus Stomach Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Ovary Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Spleen Liver (HepG2) Prostate (RWPE1) Lung
Transcript factors that have rs560582973[chr6:47053560]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 47053553 47053574 IRF1 JASPAR yes 101995492
chr6 47053555 47053570 IRF9 JASPAR yes 101995493
chr6 47053557 47053575 IRF2 JASPAR yes 101995494
chr6 47053559 47053580 IRF1 JASPAR yes 101995495
Genes associated with rs560582973[chr6:47053560], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More