EnhancerDB
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  3. rs560589178[chr2:240168694]
Enhancers that have rs560589178[chr2:240168694]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 240159334 240219661 enh6224
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr2 240168373 240168774 vista35491
VISTA
Transcript factors that have rs560589178[chr2:240168694]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 240168690 240168698 CREB1 JASPAR yes 22245375
chr2 240168690 240168698 CREB1 JASPAR yes 82220673
chr2 240168692 240168697 ATF1 TRANSFAC yes 22245376
chr2 240168692 240168697 ATF1 TRANSFAC yes 82220674
chr2 240168694 240168706 HNF1B JASPAR yes 22245377
chr2 240168694 240168706 HNF1B JASPAR yes 82220675
Genes associated with rs560589178[chr2:240168694], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More