EnhancerDB
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  3. rs560605883[chr19:5966617]
Enhancers that have rs560605883[chr19:5966617]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 5941853 5970935 enh4982
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs560605883[chr19:5966617]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 5965936 5967010 TEF1 GTRD no Bone (Osteoblast) 21843739
chr19 5965936 5967010 TEF1 GTRD no Bone (Osteoblast) 108376090
chr19 5966074 5966708 ZBTB33 GTRD no Brain (SK-N-SH) 21843741
chr19 5966074 5966708 ZBTB33 GTRD no Brain (SK-N-SH) 108376092
chr19 5966088 5966761 ZBTB33 GTRD no Brain (SK-N-SH) 21843742
chr19 5966088 5966761 ZBTB33 GTRD no Brain (SK-N-SH) 108376093
chr19 5966105 5966654 ZBTB33 GTRD no Brain (SK-N-SH) 21843745
chr19 5966105 5966654 ZBTB33 GTRD no Brain (SK-N-SH) 108376096
chr19 5966115 5966689 ZBTB33 GTRD no Brain (SK-N-SH) 21843746
chr19 5966115 5966689 ZBTB33 GTRD no Brain (SK-N-SH) 108376097
chr19 5966352 5966687 ZNF274 GTRD no Bone Marrow (K562) 21843753
chr19 5966352 5966687 ZNF274 GTRD no Bone Marrow (K562) 108376104
Genes associated with rs560605883[chr19:5966617], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More