EnhancerDB
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  3. rs560633226[chr16:81617435]
Enhancers that have rs560633226[chr16:81617435]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 81542851 81638595 enh16838
Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs560633226[chr16:81617435]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 81615804 81617737 TCF7L2 GTRD no Colon (HCT116) 21717677
chr16 81615804 81617737 TCF7L2 GTRD no Colon (HCT116) 108209733
chr16 81616176 81617770 ZNF143 GTRD no Epithelial (MCF-7) 21717678
chr16 81616176 81617770 ZNF143 GTRD no Epithelial (MCF-7) 108209734
chr16 81616211 81618756 ZBTB33 GTRD no Lung (A549) 108209735
chr16 81616956 81618232 ZNF274 GTRD no Bone Marrow (K562) 108209736
chr16 81617136 81617668 TCF7L2 GTRD no Colon (HCT116) 21717679
chr16 81617136 81617668 TCF7L2 GTRD no Colon (HCT116) 108209737
chr16 81617303 81617959 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108209738
chr16 81617402 81617866 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21717680
chr16 81617402 81617866 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108209739
chr16 81617421 81617941 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108209740
chr16 81617433 81617438 GATA2 JASPAR yes 11847381
Genes associated with rs560633226[chr16:81617435], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More