EnhancerDB
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  3. rs560640159[chr1:226851180]
Enhancers that have rs560640159[chr1:226851180]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 226838901 226907579 enh973
Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs560640159[chr1:226851180]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 226851160 226851181 ZNF263 JASPAR yes 35829521
chr1 226851167 226851180 SCRT2 JASPAR yes 35829523
chr1 226851175 226851186 TFAP2A JASPAR yes 35829524
chr1 226851175 226851186 TFAP2C JASPAR yes 35829525
Genes associated with rs560640159[chr1:226851180], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More