EnhancerDB
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  3. rs560671625[chr3:188012654]
Enhancers that have rs560671625[chr3:188012654]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 187996529 188025195 enh48785
Liver Colon (HCT116) Adrenal Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs560671625[chr3:188012654]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 188012636 188013328 EP300 UCSC Txn Factor no Conserved 108531367
chr3 188012638 188012656 TP63 JASPAR yes 8468426
chr3 188012654 188013153 NFIC UCSC Txn Factor no Conserved 108531368
Genes associated with rs560671625[chr3:188012654], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More