EnhancerDB
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  3. rs560679961[chr3:58023983]
Enhancers that have rs560679961[chr3:58023983]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 58016005 58062055 enh20647
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs560679961[chr3:58023983]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 58023971 58023989 RARA JASPAR yes 2667651
chr3 58023978 58023991 NR2F1 JASPAR yes 2667652
chr3 58023982 58023990 CREB1 JASPAR yes 2667653
Genes associated with rs560679961[chr3:58023983], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More