EnhancerDB
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  3. rs560705962[chr17:2757270]
Enhancers that have rs560705962[chr17:2757270]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 2744850 2808324 enh4213
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Neural Stem Cells (H9) Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs560705962[chr17:2757270]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 2757161 2758722 EZH2 UCSC Txn Factor no Conserved 108231299
chr17 2757249 2757881 ZNF143 GTRD no Epithelial (MCF-7) 21739731
chr17 2757249 2757881 ZNF143 GTRD no Epithelial (MCF-7) 108231300
chr17 2757267 2757271 LFA1 TRANSFAC yes 52777786
chr17 2757269 2757284 ZIC4 JASPAR yes 52777787
chr17 2757269 2757285 GLIS1 JASPAR yes 52777788
chr17 2757270 2757284 ZIC1 JASPAR yes 52777789
Genes associated with rs560705962[chr17:2757270], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More