EnhancerDB
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  3. rs560715519[chr1:156073057]
Enhancers that have rs560715519[chr1:156073057]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 156063928 156076316 enh12294
Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Bone (Osteoblast) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 156072303 156076849 vista105
VISTA
Transcript factors that have rs560715519[chr1:156073057]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 156072366 156073518 ZNF274 GTRD no Liver (HepG2) 21341853
chr1 156072366 156073518 ZNF274 GTRD no Liver (HepG2) 107835873
chr1 156072366 156073518 ZNF274 GTRD no Liver (HepG2) 107835874
chr1 156072649 156073173 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21341854
chr1 156072649 156073173 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 107835876
chr1 156072853 156073169 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21341855
chr1 156072853 156073169 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107835877
chr1 156073026 156073551 ZNF274 GTRD no Liver (HepG2) 21341856
chr1 156073026 156073551 ZNF274 GTRD no Liver (HepG2) 107835878
chr1 156073052 156073071 RFX2 JASPAR yes 32374438
chr1 156073052 156073071 RFX2 JASPAR yes 71148482
Genes associated with rs560715519[chr1:156073057], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More