EnhancerDB
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  3. rs560716941[chr11:122568477]
Enhancers that have rs560716941[chr11:122568477]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 122527985 122597555 enh2064
Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
chr11 122568426 122568832 vista11877
VISTA
Transcript factors that have rs560716941[chr11:122568477]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 122568293 122568663 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108004377
chr11 122568344 122568608 CEBPB UCSC Txn Factor no Conserved 108004378
chr11 122568344 122568608 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108004379
chr11 122568345 122568601 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21519671
chr11 122568345 122568601 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108004380
chr11 122568365 122568601 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108004381
chr11 122568393 122568697 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108004382
chr11 122568403 122568693 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108004383
chr11 122568467 122568478 FOS JASPAR yes 42021031
chr11 122568467 122568478 FOSL1 JASPAR yes 42021032
chr11 122568467 122568478 FOS JASPAR yes 114145999
chr11 122568467 122568478 FOSL1 JASPAR yes 114146000
chr11 122568468 122568477 JDP2 JASPAR yes 42021033
chr11 122568468 122568477 JDP2 JASPAR yes 114146001
chr11 122568468 122568479 JUNB JASPAR yes 42021034
chr11 122568468 122568479 JUNB JASPAR yes 114146002
chr11 122568468 122568482 JUN JASPAR yes 42021035
chr11 122568468 122568482 JUN JASPAR yes 114146003
chr11 122568469 122568480 BATF JASPAR yes 42021036
chr11 122568469 122568480 BATF JASPAR yes 114146004
Genes associated with rs560716941[chr11:122568477], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More