EnhancerDB
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  3. rs560733295[chr6:37109618]
Enhancers that have rs560733295[chr6:37109618]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 37090285 37118455 enh23203
Bone Marrow (K562) Liver Astrocyte Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr6 37109258 37109689 vista51796
VISTA
Transcript factors that have rs560733295[chr6:37109618]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 37109386 37109636 TEAD4 UCSC Txn Factor no Conserved 108540029
chr6 37109609 37109629 RREB1 JASPAR yes 70357360
chr6 37109609 37109629 RREB1 JASPAR yes 101391363
chr6 37109612 37109627 RUNX2 JASPAR yes 70357361
chr6 37109612 37109627 RUNX2 JASPAR yes 101391364
chr6 37109613 37109624 RUNX1 JASPAR yes 70357363
chr6 37109613 37109624 RUNX1 JASPAR yes 101391366
chr6 37109613 37109628 MEF2C JASPAR yes 70357364
chr6 37109613 37109628 MEF2C JASPAR yes 101391367
chr6 37109613 37109634 IRF1 JASPAR yes 70357365
chr6 37109613 37109634 IRF1 JASPAR yes 101391368
chr6 37109614 37109634 RREB1 JASPAR yes 70357366
chr6 37109614 37109634 RREB1 JASPAR yes 101391369
chr6 37109614 37109635 IRF1 JASPAR yes 70357367
chr6 37109614 37109635 IRF1 JASPAR yes 101391370
chr6 37109616 37109631 FOXP1 JASPAR yes 70357368
chr6 37109616 37109631 FOXP1 JASPAR yes 101391371
chr6 37109617 37109632 FOXP1 JASPAR yes 70357369
chr6 37109617 37109632 FOXP1 JASPAR yes 101391372
chr6 37109617 37109638 IRF1 JASPAR yes 70357370
chr6 37109617 37109638 IRF1 JASPAR yes 101391373
chr6 37109618 37109633 FOXP1 JASPAR yes 70357371
chr6 37109618 37109633 FOXP1 JASPAR yes 101391374
chr6 37109618 37109639 IRF1 JASPAR yes 70357372
chr6 37109618 37109639 IRF1 JASPAR yes 101391375
Genes associated with rs560733295[chr6:37109618], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More