EnhancerDB
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  3. rs56075025[chr16:85235036]
Enhancers that have rs56075025[chr16:85235036]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85219145 85290912 enh16864
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs56075025[chr16:85235036]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85230964 85237139 ZNF274 GTRD no Blood (GM12878) 21720857
chr16 85231788 85239840 TCF7L2 GTRD no Colon (HCT116) 21720868
chr16 85233505 85237815 TCF7L2 GTRD no Colon (HCT116) 21720908
chr16 85233570 85237019 ZNF274 GTRD no Blood (GM12878) 21720912
chr16 85233641 85237669 TCF7L2 GTRD no Colon (HCT116) 21720914
chr16 85233712 85236641 TCF7L2 GTRD no Colon (HCT116) 21720915
chr16 85234016 85235047 ZNF274 GTRD no Liver (HepG2) 21720924
chr16 85234023 85235227 ZNF274 GTRD no Bone Marrow (K562) 21720925
chr16 85234068 85235054 ZNF274 GTRD no Bone Marrow (K562) 21720933
chr16 85234078 85238980 TCF7L2 GTRD no Colon (HCT116) 21720936
chr16 85234083 85236653 TCF7L2 GTRD no Colon (HCT116) 21720939
chr16 85234091 85235131 ZNF274 GTRD no Liver (HepG2) 21720941
chr16 85234158 85236441 TCF7L2 GTRD no Colon (HCT116) 21720949
chr16 85234215 85236205 ZNF274 GTRD no Bone Marrow (K562) 21720953
chr16 85234217 85235595 ZBTB33 GTRD no Brain (SK-N-SH) 21720954
chr16 85234219 85235133 ZNF274 GTRD no Liver (HepG2) 21720955
chr16 85234228 85235043 ZNF274 GTRD no Liver (HepG2) 21720958
chr16 85234231 85235066 ZNF143 GTRD no Epithelial (MCF-7) 21720959
chr16 85234250 85235085 ZNF274 GTRD no Liver (HepG2) 21720962
chr16 85234277 85235051 ZNF143 GTRD no Epithelial (MCF-7) 21720966
chr16 85234284 85236128 ZNF274 GTRD no Bone Marrow (K562) 21720968
chr16 85234305 85236271 ZNF274 GTRD no Bone Marrow (K562) 21720969
chr16 85234317 85235065 ZNF274 GTRD no Liver (HepG2) 21720971
chr16 85234329 85235060 ZNF274 GTRD no Bone Marrow (K562) 21720973
chr16 85234336 85235775 ZNF143 GTRD no Epithelial (MCF-7) 21720974
chr16 85234344 85235114 ZBTB33 GTRD no Brain (SK-N-SH) 21720976
chr16 85234362 85236526 TCF7L2 GTRD no Colon (HCT116) 21720978
chr16 85234382 85235826 ZNF274 GTRD no Cervix (HeLa-S3) 21720983
chr16 85234393 85236355 TCF7L2 GTRD no Colon (HCT116) 21720986
chr16 85234395 85235060 ZBTB33 GTRD no Brain (SK-N-SH) 21720987
chr16 85234429 85235041 ZNF143 GTRD no Epithelial (MCF-7) 21720991
chr16 85234441 85236228 ZNF274 GTRD no Bone Marrow (K562) 21720993
chr16 85234528 85235716 ZBTB33 GTRD no Brain (SK-N-SH) 21721000
chr16 85234531 85236354 TCF7L2 GTRD no Colon (HCT116) 21721001
chr16 85234560 85235436 ZNF274 GTRD no Liver (HepG2) 21721004
chr16 85234582 85236342 TCF7L2 GTRD no Colon (HCT116) 21721006
chr16 85234616 85235079 SOX2 GTRD no Neural Stem Cells (H9) 21721008
chr16 85234644 85236299 TCF7L2 GTRD no Colon (HCT116) 21721009
chr16 85234650 85235092 SOX2 GTRD no Neural Stem Cells (H9) 21721010
chr16 85234752 85236303 TCF7L2 GTRD no Colon (HCT116) 21721012
chr16 85234883 85235818 ZNF274 GTRD no Blood (GM12878) 21721013
chr16 85234990 85236919 ZNF274 GTRD no Blood (GM12878) 21721014
chr16 85234998 85237199 ZNF274 GTRD no Blood (GM12878) 21721015
chr16 85235008 85236141 TCF7L2 GTRD no Colon (HCT116) 21721016
chr16 85235015 85237146 ZNF274 GTRD no Blood (GM12878) 21721017
chr16 85235024 85235040 GLIS1 JASPAR yes 12031782
chr16 85235025 85236588 ZNF274 GTRD no Blood (GM12878) 21721018
chr16 85235029 85235612 ZNF274 GTRD no Blood (GM12878) 21721019
chr16 85235030 85235036 SP1 TRANSFAC yes 12031783
chr16 85235031 85235036 SP1 TRANSFAC yes 12031784
chr16 85235036 85235042 ZNF354C JASPAR yes 12031785
Genes associated with rs56075025[chr16:85235036], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More