EnhancerDB
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  3. rs560770838[chr17:2129568]
Enhancers that have rs560770838[chr17:2129568]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 2090104 2130255 enh4208
Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Esophagus Blood (GM12878) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs560770838[chr17:2129568]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 2129564 2129585 IRF1 JASPAR yes 52740097
chr17 2129568 2129589 IRF1 JASPAR yes 52740098
Genes associated with rs560770838[chr17:2129568], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More