EnhancerDB
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  3. rs560779055[chr11:12838066]
Enhancers that have rs560779055[chr11:12838066]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 12804154 12848277 enh13788
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs560779055[chr11:12838066]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 12838065 12838080 FOXA1 JASPAR yes 37481484
chr11 12838066 12838072 TCF4 TRANSFAC yes 37481485
Genes associated with rs560779055[chr11:12838066], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More