EnhancerDB
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  3. rs560815136[chr17:55553349]
Enhancers that have rs560815136[chr17:55553349]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55530146 55569915 enh4488
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs560815136[chr17:55553349]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55553348 55553360 PKNOX1 JASPAR yes 54959125
chr17 55553348 55553360 PKNOX2 JASPAR yes 54959126
chr17 55553348 55553360 TGIF1 JASPAR yes 54959127
chr17 55553348 55553360 TGIF2 JASPAR yes 54959128
chr17 55553349 55553359 TFAP4 JASPAR yes 54959129
Genes associated with rs560815136[chr17:55553349], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More