EnhancerDB
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  3. rs560836800[chr2:102438227]
Enhancers that have rs560836800[chr2:102438227]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 102416803 102440155 enh18762
Brain (SK-N-MC) Liver Astrocyte Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs560836800[chr2:102438227]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 102438215 102438231 POU4F3 JASPAR yes 75844454
chr2 102438217 102438231 POU4F1 JASPAR yes 75844455
chr2 102438217 102438232 HNF1A JASPAR yes 75844456
chr2 102438218 102438231 HNF1B JASPAR yes 75844457
chr2 102438218 102438232 POU4F1 JASPAR yes 75844458
chr2 102438218 102438234 POU4F2 JASPAR yes 75844459
chr2 102438218 102438234 POU4F3 JASPAR yes 75844460
chr2 102438219 102438231 HNF1B JASPAR yes 75844461
chr2 102438221 102438231 ESX1 JASPAR yes 75844462
chr2 102438221 102438231 GSX2 JASPAR yes 75844463
chr2 102438221 102438231 HOXB2 JASPAR yes 75844464
chr2 102438221 102438231 HOXB3 JASPAR yes 75844465
chr2 102438221 102438231 LHX6 JASPAR yes 75844466
chr2 102438221 102438231 MEOX2 JASPAR yes 75844467
chr2 102438221 102438231 MNX1 JASPAR yes 75844468
chr2 102438221 102438231 POU6F1 JASPAR yes 75844469
chr2 102438221 102438231 RAX JASPAR yes 75844470
chr2 102438222 102438230 LMX1A JASPAR yes 75844471
chr2 102438222 102438230 LMX1B JASPAR yes 75844472
chr2 102438222 102438230 NKX6-1 JASPAR yes 75844473
chr2 102438222 102438230 NKX6-2 JASPAR yes 75844474
chr2 102438222 102438230 VAX1 JASPAR yes 75844475
chr2 102438222 102438230 VAX2 JASPAR yes 75844476
chr2 102438222 102438230 VSX1 JASPAR yes 75844477
chr2 102438222 102438230 VSX2 JASPAR yes 75844478
chr2 102438222 102438232 POU6F2 JASPAR yes 75844479
chr2 102438225 102438235 HMBOX1 JASPAR yes 75844480
chr2 102438225 102438239 RORA JASPAR yes 75844481
chr2 102438226 102438234 LBX1 JASPAR yes 75844482
chr2 102438227 102438230 MYB TRANSFAC yes 75844483
chr2 102438227 102438238 PHOX2A JASPAR yes 75844484
chr2 102438227 102438238 PROP1 JASPAR yes 75844485
Genes associated with rs560836800[chr2:102438227], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More