EnhancerDB
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  3. rs560837731[chr1:117399354]
Enhancers that have rs560837731[chr1:117399354]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 117386845 117406031 enh12189
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Esophagus Astrocyte Stomach Muscle (A673) Placenta Uterus Lung (PC-9) Pancreas Pancreas (Panc1) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs560837731[chr1:117399354]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 117398864 117399479 ZNF274 GTRD no Bone Marrow (K562) 21333975
chr1 117398876 117399418 ZNF274 GTRD no Bone Marrow (K562) 21333976
chr1 117399345 117399363 IRF2 JASPAR yes 31845205
chr1 117399346 117399367 IRF1 JASPAR yes 31845206
chr1 117399350 117399362 IRF1 JASPAR yes 31845207
chr1 117399351 117399361 HOXA13 JASPAR yes 31845208
chr1 117399351 117399361 HOXB13 JASPAR yes 31845209
chr1 117399351 117399361 HOXD13 JASPAR yes 31845210
chr1 117399351 117399362 HOXA10 JASPAR yes 31845211
chr1 117399352 117399361 CDX1 JASPAR yes 31845212
chr1 117399352 117399363 CDX2 JASPAR yes 31845213
chr1 117399353 117399365 MEF2A JASPAR yes 31845214
chr1 117399353 117399365 MEF2B JASPAR yes 31845215
chr1 117399353 117399365 MEF2D JASPAR yes 31845216
Genes associated with rs560837731[chr1:117399354], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More