EnhancerDB
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  3. rs560886315[chr1:52034451]
Enhancers that have rs560886315[chr1:52034451]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 52027839 52037840 enh360
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Prostate (RWPE1) Heart
Transcript factors that have rs560886315[chr1:52034451]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 52031407 52034455 ZNF274 GTRD no Blood (GM12878) 107803247
chr1 52031548 52034559 ZNF274 GTRD no Bone Marrow (K562) 107803252
chr1 52031652 52034477 ZNF274 GTRD no Blood (GM12878) 107803253
chr1 52031689 52034527 ZNF274 GTRD no Blood (GM12878) 107803254
chr1 52032228 52034452 ZNF274 GTRD no Liver (HepG2) 107803271
chr1 52032596 52034484 ZNF143 GTRD no Epithelial (MCF-7) 107803297
chr1 52032610 52034500 ZBTB33 GTRD no Lung (A549) 107803305
chr1 52032652 52034541 ZNF274 GTRD no Liver (HepG2) 107803315
chr1 52033161 52034489 ZNF274 GTRD no Liver (HepG2) 107803370
chr1 52033171 52034613 ZNF274 GTRD no Bone Marrow (K562) 107803376
chr1 52033485 52034533 ZNF274 GTRD no Cervix (HeLa-S3) 107803442
chr1 52034443 52034458 HNF4A JASPAR yes 28851927
Genes associated with rs560886315[chr1:52034451], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More