EnhancerDB
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  3. rs56089811[chr16:85286061]
Enhancers that have rs56089811[chr16:85286061]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85219145 85290912 enh16864
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs56089811[chr16:85286061]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85285698 85287426 ZBTB33 GTRD no Brain (SK-N-SH) 21722071
chr16 85285699 85286162 MYOD GTRD no Muscle (Myoblast) 21722072
chr16 85285707 85286707 ZNF143 GTRD no Epithelial (MCF-7) 21722073
chr16 85285770 85286716 AR GTRD no Prostate (PC-3) 21722074
chr16 85285882 85286540 TCF7L2 GTRD no Colon (HCT116) 21722076
chr16 85285882 85287990 TEF1 GTRD no Bone (Osteoblast) 21722077
chr16 85285883 85286308 TCF7L2 GTRD no Colon (HCT116) 21722078
chr16 85285945 85286597 ZBTB33 GTRD no Brain (SK-N-SH) 21722079
chr16 85285946 85287199 ZBTB33 GTRD no Brain (SK-N-SH) 21722080
chr16 85285963 85286528 ZNF143 GTRD no Epithelial (MCF-7) 21722081
chr16 85285976 85286592 ZNF143 GTRD no Epithelial (MCF-7) 21722082
chr16 85286053 85286066 NFKB2 JASPAR yes 12039016
chr16 85286057 85286069 ZBTB7B JASPAR yes 12039017
Genes associated with rs56089811[chr16:85286061], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More