EnhancerDB
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  3. rs560956928[chr1:203254104]
Enhancers that have rs560956928[chr1:203254104]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 203242209 203262675 enh881
Bone Marrow (K562) Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs560956928[chr1:203254104]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 203254097 203254105 MEIS2 JASPAR yes 34613536
chr1 203254097 203254105 MEIS3 JASPAR yes 34613537
chr1 203254100 203254108 NKX6-1 JASPAR yes 34613539
chr1 203254100 203254110 HOXC10 JASPAR yes 34613540
chr1 203254102 203254106 YY1 TRANSFAC yes 34613541
Genes associated with rs560956928[chr1:203254104], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More