EnhancerDB
  1. Home
  2. SNP
  3. rs561047552[chr17:2788997]
Enhancers that have rs561047552[chr17:2788997]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 2744850 2808324 enh4213
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Neural Stem Cells (H9) Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs561047552[chr17:2788997]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 2788990 2789001 ELK4 JASPAR yes 52782178
chr17 2788990 2789001 FLI1 JASPAR yes 52782179
chr17 2788991 2789001 GABPA JASPAR yes 52782180
chr17 2788991 2789004 ELF1 JASPAR yes 52782181
chr17 2788996 2789004 MEIS3 JASPAR yes 52782182
chr17 2788997 2789001 NFE TRANSFAC yes 52782183
Genes associated with rs561047552[chr17:2788997], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More