EnhancerDB
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  3. rs56108819[chr3:124557534]
Enhancers that have rs56108819[chr3:124557534]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 124541185 124560055 enh20881
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs56108819[chr3:124557534]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 124557529 124557538 SP1 TRANSFAC yes 5406211
chr3 124557530 124557538 SP1 TRANSFAC yes 5406212
chr3 124557530 124557540 SP1 JASPAR yes 5406213
chr3 124557533 124557545 TFAP2A JASPAR yes 5406214
Genes associated with rs56108819[chr3:124557534], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More