EnhancerDB
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  3. rs561088560[chr1:8782197]
Enhancers that have rs561088560[chr1:8782197]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 8756385 8790235 enh11474
Brain (SK-N-MC) Astrocyte Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs561088560[chr1:8782197]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 8782192 8782207 RUNX2 JASPAR yes 26591596
chr1 8782193 8782204 RUNX1 JASPAR yes 26591597
Genes associated with rs561088560[chr1:8782197], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More