EnhancerDB
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  3. rs561145466[chr15:39428018]
Enhancers that have rs561145466[chr15:39428018]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 39405340 39429015 enh31301
Astrocyte Adrenal Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs561145466[chr15:39428018]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 39427356 39428520 AR GTRD no Prostate (PC-3) 21647997
chr15 39427653 39428181 ZNF274 GTRD no Liver (HepG2) 21647998
chr15 39427672 39428092 ZNF274 GTRD no Liver (HepG2) 21647999
chr15 39427680 39428093 ZNF274 GTRD no Cervix (HeLa-S3) 21648000
chr15 39427695 39428129 ZNF274 GTRD no Liver (HepG2) 21648001
chr15 39427704 39428193 ZNF274 GTRD no Liver (HepG2) 21648002
chr15 39427743 39428068 ZNF274 GTRD no Liver (HepG2) 21648003
chr15 39427752 39428065 ZNF274 GTRD no Liver (HepG2) 21648004
chr15 39427790 39428204 ZNF274 GTRD no Liver (HepG2) 21648005
chr15 39427997 39428018 IRF1 JASPAR yes 22856770
chr15 39427998 39428019 IRF1 JASPAR yes 22856772
chr15 39427999 39428020 IRF1 JASPAR yes 22856774
chr15 39428003 39428018 FOXP1 JASPAR yes 22856778
chr15 39428004 39428019 FOXP1 JASPAR yes 22856779
chr15 39428005 39428020 FOXP1 JASPAR yes 22856780
chr15 39428006 39428021 FOXP1 JASPAR yes 22856781
chr15 39428009 39428024 MEF2C JASPAR yes 22856782
Genes associated with rs561145466[chr15:39428018], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More