EnhancerDB
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  3. rs561148543[chr17:48987298]
Enhancers that have rs561148543[chr17:48987298]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 48974385 49015197 enh4464
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs561148543[chr17:48987298]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 48986748 48987312 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21770701
chr17 48987121 48987431 ZNF274 GTRD no Bone Marrow (K562) 21770703
chr17 48987157 48987377 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21770704
chr17 48987200 48987835 ZNF274 GTRD no Bone Marrow (K562) 21770705
chr17 48987286 48987551 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21770706
chr17 48987297 48987310 NFKB2 JASPAR yes 54732487
Genes associated with rs561148543[chr17:48987298], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More