EnhancerDB
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  3. rs561153439[chr1:173378174]
Enhancers that have rs561153439[chr1:173378174]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 173367664 173402717 enh734
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Muscle (A673)
Transcript factors that have rs561153439[chr1:173378174]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 173378089 173378319 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21351272
chr1 173378164 173378185 IRF1 JASPAR yes 33196472
chr1 173378166 173378181 IRF9 JASPAR yes 33196473
chr1 173378167 173378181 IRF7 JASPAR yes 33196474
chr1 173378169 173378184 SOX21 JASPAR yes 33196475
chr1 173378169 173378185 SOX4 JASPAR yes 33196476
Genes associated with rs561153439[chr1:173378174], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More