EnhancerDB
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  3. rs561181661[chr5:77905589]
Enhancers that have rs561181661[chr5:77905589]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 77878525 77914000 enh48956
Brain (SK-N-MC) Colon (HCT116) Adrenal Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs561181661[chr5:77905589]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 77905584 77905605 IRF1 JASPAR yes 63606194
chr5 77905586 77905601 PRDM1 JASPAR yes 63606195
chr5 77905586 77905601 STAT2 JASPAR yes 63606196
chr5 77905587 77905601 SPIC JASPAR yes 63606197
chr5 77905587 77905601 STAT1 JASPAR yes 63606198
chr5 77905588 77905602 IRF7 JASPAR yes 63606199
chr5 77905588 77905602 IRF8 JASPAR yes 63606200
chr5 77905588 77905603 IRF9 JASPAR yes 63606201
Genes associated with rs561181661[chr5:77905589], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More