EnhancerDB
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  3. rs561194948[chr16:85269579]
Enhancers that have rs561194948[chr16:85269579]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85219145 85290912 enh16864
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs561194948[chr16:85269579]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85269120 85269720 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21721772
chr16 85269299 85269669 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21721775
chr16 85269318 85269582 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21721776
chr16 85269325 85269701 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21721777
chr16 85269338 85269642 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21721779
chr16 85269368 85269644 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21721780
chr16 85269368 85269704 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21721781
chr16 85269375 85269685 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21721782
chr16 85269376 85269636 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21721783
chr16 85269396 85269600 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21721785
chr16 85269408 85269658 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21721786
chr16 85269501 85269950 TCF7L2 GTRD no Colon (HCT116) 21721788
chr16 85269574 85269593 REST JASPAR yes 12036697
chr16 85269575 85271034 ZBTB33 GTRD no Brain (SK-N-SH) 21721789
Genes associated with rs561194948[chr16:85269579], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More