EnhancerDB
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  3. rs561222500[chr17:2773213]
Enhancers that have rs561222500[chr17:2773213]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 2744850 2808324 enh4213
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Neural Stem Cells (H9) Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs561222500[chr17:2773213]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 2773205 2773219 CREB3 JASPAR yes 52779953
chr17 2773206 2773216 MAX JASPAR yes 52779954
chr17 2773206 2773217 USF1 JASPAR yes 52779955
chr17 2773206 2773217 USF2 JASPAR yes 52779956
chr17 2773207 2773217 TFE3 JASPAR yes 52779957
chr17 2773207 2773217 TFEB JASPAR yes 52779958
chr17 2773207 2773217 TFEC JASPAR yes 52779959
chr17 2773207 2773218 USF2 JASPAR yes 52779960
chr17 2773208 2773215 USF1 JASPAR yes 52779961
chr17 2773209 2773214 MYC TRANSFAC yes 52779962
chr17 2773209 2773214 USF1 TRANSFAC yes 52779963
chr17 2773209 2773214 USF2 TRANSFAC yes 52779964
Genes associated with rs561222500[chr17:2773213], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More