EnhancerDB
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  3. rs561228041[chr1:27863486]
Enhancers that have rs561228041[chr1:27863486]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 27859909 27873735 enh11667
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Liver (HepG2) Heart
Transcript factors that have rs561228041[chr1:27863486]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 27861998 27863865 ZNF274 GTRD no Blood (GM12878) 107802586
chr1 27863471 27863486 TFAP2A JASPAR yes 27706415
chr1 27863473 27863488 TFAP2C JASPAR yes 27706416
chr1 27863474 27863486 INSM1 JASPAR yes 27706420
chr1 27863474 27863486 TFAP2A JASPAR yes 27706421
chr1 27863474 27863486 TFAP2B JASPAR yes 27706422
chr1 27863474 27863486 TFAP2C JASPAR yes 27706423
Genes associated with rs561228041[chr1:27863486], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More