EnhancerDB
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  3. rs561240639[chr1:43404766]
Enhancers that have rs561240639[chr1:43404766]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 43394865 43408895 enh296
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Muscle (A673) Heart
Transcript factors that have rs561240639[chr1:43404766]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 43401578 43404928 POLR2A UCSC Txn Factor no Conserved 107803002
chr1 43401578 43404928 POLR2A UCSC Txn Factor no Conserved 107803003
chr1 43404327 43406254 ZNF274 GTRD no Bone Marrow (K562) 107803004
chr1 43404327 43406254 ZNF274 GTRD no Bone Marrow (K562) 107803005
chr1 43404754 43404771 PAX1 JASPAR yes 28468520
chr1 43404754 43404771 PAX9 JASPAR yes 28468521
chr1 43404766 43404772 TCF4 TRANSFAC yes 28468522
Genes associated with rs561240639[chr1:43404766], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More