EnhancerDB
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  3. rs561256610[chr1:204256315]
Enhancers that have rs561256610[chr1:204256315]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 204245511 204275535 enh12577
Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 204255998 204256379 vista4676
VISTA
Transcript factors that have rs561256610[chr1:204256315]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 204255965 204256435 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21370360
chr1 204255965 204256435 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 107859801
chr1 204255965 204256675 GATA3 UCSC Txn Factor no Conserved 107859802
chr1 204255972 204256522 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107859803
chr1 204255972 204256659 GATA2 UCSC Txn Factor no Conserved 107859804
chr1 204256013 204256669 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21370361
chr1 204256013 204256669 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 107859805
chr1 204256123 204256599 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21370363
chr1 204256123 204256599 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107859807
chr1 204256170 204256740 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21370364
chr1 204256170 204256740 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 107859808
chr1 204256182 204256652 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21370365
chr1 204256182 204256652 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 107859809
chr1 204256214 204256598 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107859810
chr1 204256218 204256528 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107859811
chr1 204256223 204256427 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107859812
chr1 204256223 204256493 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107859813
chr1 204256223 204256512 USF2 UCSC Txn Factor no Conserved 107859814
chr1 204256236 204256512 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107859815
chr1 204256249 204256513 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 107859816
chr1 204256260 204256550 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21370366
chr1 204256260 204256550 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107859817
chr1 204256264 204256504 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21370367
chr1 204256264 204256504 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107859818
chr1 204256270 204256550 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21370368
chr1 204256270 204256550 FOXA1 UCSC Txn Factor no Conserved 107859819
chr1 204256270 204256550 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107859820
chr1 204256309 204256316 SP1 TRANSFAC yes 34688440
chr1 204256309 204256316 SP1 TRANSFAC yes 118437751
chr1 204256309 204256319 SP1 JASPAR yes 34688441
chr1 204256309 204256319 SP1 JASPAR yes 118437752
chr1 204256309 204256330 ZNF263 JASPAR yes 34688442
chr1 204256309 204256330 ZNF263 JASPAR yes 118437753
chr1 204256310 204256321 E2F1 JASPAR yes 34688443
chr1 204256310 204256321 E2F1 JASPAR yes 118437754
chr1 204256311 204256316 SP1 TRANSFAC yes 34688444
chr1 204256311 204256316 SP1 TRANSFAC yes 118437755
chr1 204256311 204256322 E2F4 JASPAR yes 34688445
chr1 204256311 204256322 E2F6 JASPAR yes 34688446
chr1 204256311 204256322 E2F4 JASPAR yes 118437756
chr1 204256311 204256322 E2F6 JASPAR yes 118437757
chr1 204256312 204256317 SP1 TRANSFAC yes 34688447
chr1 204256312 204256317 SP1 TRANSFAC yes 118437758
chr1 204256313 204256452 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21370369
chr1 204256313 204256452 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 107859821
Genes associated with rs561256610[chr1:204256315], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More