EnhancerDB
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  3. rs561272[chr1:39644164]
Enhancers that have rs561272[chr1:39644164]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 39628825 39647095 enh11760
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Liver Stomach Muscle (A673) Placenta Thyroid Uterus Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Neural Stem Cells (H9) Heart
Transcript factors that have rs561272[chr1:39644164]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 39644131 39644601 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 107802895
chr1 39644144 39644165 IRF1 JASPAR yes 28263066
chr1 39644157 39644168 E2F6 JASPAR yes 28263068
Genes associated with rs561272[chr1:39644164], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More