EnhancerDB
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  3. rs56127829[chr2:238570848]
Enhancers that have rs56127829[chr2:238570848]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 238567229 238591955 enh19400
Brain (SK-N-MC) Liver Astrocyte Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Neural Stem Cells (H9) Thymus Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs56127829[chr2:238570848]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 238570837 238570848 USF1 JASPAR yes 82128793
chr2 238570837 238570851 PLAG1 JASPAR yes 82128794
chr2 238570838 238570848 MAX JASPAR yes 82128796
chr2 238570847 238570853 SP1 TRANSFAC yes 82128801
Genes associated with rs56127829[chr2:238570848], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More