EnhancerDB
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  3. rs56128957[chr12:125224553]
Enhancers that have rs56128957[chr12:125224553]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125176905 125261395 enh2676
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs56128957[chr12:125224553]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125224232 125225149 SETDB1 UCSC Txn Factor no Conserved 108069704
chr12 125224412 125224828 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21582523
chr12 125224412 125224828 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108069705
chr12 125224437 125224821 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21582524
chr12 125224437 125224821 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108069706
chr12 125224496 125224906 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21582525
chr12 125224496 125224906 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108069707
chr12 125224515 125224911 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21582526
chr12 125224515 125224911 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108069708
chr12 125224543 125224554 STAT3 JASPAR yes 124415969
chr12 125224543 125224558 HSF1 JASPAR yes 124415970
chr12 125224543 125224883 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21582527
chr12 125224543 125224883 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108069709
chr12 125224544 125224557 HSF1 JASPAR yes 124415971
chr12 125224544 125224557 HSF2 JASPAR yes 124415972
chr12 125224544 125224557 HSF4 JASPAR yes 124415973
Genes associated with rs56128957[chr12:125224553], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More