EnhancerDB
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  3. rs561304235[chr1:8172446]
Enhancers that have rs561304235[chr1:8172446]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 8164245 8205415 enh11462
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs561304235[chr1:8172446]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 8172425 8172446 IRF1 JASPAR yes 26514235
chr1 8172430 8172451 IRF1 JASPAR yes 26514241
chr1 8172432 8172447 IRF9 JASPAR yes 26514242
chr1 8172432 8172452 RREB1 JASPAR yes 26514243
chr1 8172433 8172447 IRF7 JASPAR yes 26514244
chr1 8172434 8172449 STAT2 JASPAR yes 26514245
chr1 8172435 8172447 IRF1 JASPAR yes 26514246
chr1 8172435 8172450 FOXP1 JASPAR yes 26514247
chr1 8172436 8172457 IRF1 JASPAR yes 26514248
chr1 8172437 8172457 RREB1 JASPAR yes 26514249
chr1 8172444 8172459 FOXP1 JASPAR yes 26514250
chr1 8172446 8172458 FOXC2 JASPAR yes 26514251
Genes associated with rs561304235[chr1:8172446], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More